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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs7540687 chr1:158996015 T/G 2.84E-5 391 14.83 18.4 9.2 KM Plot
LGG rs7545363 chr1:201112204 A/G 8.03E-6 405 9.28 15.5 15.3 KM Plot
LGG rs75464721 chr4:182394470 G/A 7.86E-7 392 14.6 16.3 4.25 KM Plot
LGG rs75476567 chr5:155979184 C/T 5.1E-6 406 15.33 15.23 15.37 KM Plot
LGG rs75479100 chr6:57038636 CATGT/C 3.93E-6 399 15.33 15.57 7.8 KM Plot
LGG rs75488358 chr7:150738661 C/T 0.000154 404 15.32 10.77 8.97 KM Plot
LGG rs7556027 chr1:219167123 A/G 4.27E-5 407 14.43 18.17 17.73 KM Plot
LGG rs75636760 chr6:33801817 G/GAGCCGCATA 8.64E-5 406 15.2 17.7 11.42 KM Plot
LGG rs75653371 chr1:247288251 C/T 0 400 15.3 15.35 3.2 KM Plot
LGG rs75671035 chr20:3334932 G/T 1.02E-7 406 15.97 11.55 6.83 KM Plot
LGG rs75712024 chr7:55974964 T/G 1.66E-10 405 15.25 16.08 7.8 KM Plot
LGG rs75776487 chr5:155995430 C/A 5.05E-6 407 15.27 15.23 15.37 KM Plot
LGG rs7579073 chr2:25218716 A/G 0.000198 407 2.33 15.3 15.57 KM Plot
LGG rs75795972 chr2:17946447 C/T 1.43E-8 405 15.2 15.97 7.33 KM Plot
LGG rs75882785 chr21:45518084 G/A 9.51E-14 402 15.57 13.57 3.15 KM Plot